Evolving Insights into Protein Trafficking to the Multiple Compartments of the Apicomplexan Plastid1

ABSTRACT. The apicoplast is a relict plastid found in many medically important apicomplexan parasites, such as Plasmodium and Toxoplasma. Phylogenetic analysis and the presence of four bounding membranes indicate that the apicoplast arose from a secondary endosymbiosis. Here we review what has been discovered about the complex journey proteins take to reach compartments of the apicoplast. The targeting sequences for luminal proteins are well‐defined, but those routing proteins to other compartments are only beginning to be studied. Recent work suggests that the trafficking mechanisms involve a variety of molecules of different phylogenetic origins. We highlight some remaining questions regarding protein trafficking to this divergent organelle.     

Inferring past zooplanktivorous fish and macrophyte density in a shallow lake: application of a new regression tree model

1. Eutrophication has a profound effect on the biological structure and function of shallow lakes, altering the composition and abundance of submerged macrophyte and fish assemblages. Relatively little is known, however, about decadal to centennial‐scale change in these important aspects of shallow lake ecology. 2. Established palaeolimnological inference models are limited to reconstructing a single variable. As macrophyte and zooplanktivorous fish abundance exert dual and interacting controls on cladoceran assemblages a single variable inference model may contain significant error. To obviate this problem, we applied a new cladoceran‐based multivariate regression tree (MRT) model to cladoceran subfossil assemblages from dated cores from a small shallow lake (Felbrigg Lake, U.K.) to assess long‐term change in fish and submerged macrophyte abundance. Plant macrofossil, chironomid and mollusc subfossil assemblages were also analysed to track changes in biological structure and function and to evaluate the inferences of the MRT model. 3. Over the 200+ year period covered by the sediment cores, there was good agreement in the timing and nature of ecological change reflected by the plant macrofossil, mollusc, chironomid and cladoceran data. The sediment sequence was divided into three dated zones: c. 1797–1890, c. 1890–1954 and c. 1954–present. Prior to 1890 plant‐associated mollusc, cladoceran and chironomid assemblages indicated a species‐rich macrophyte community; a scenario confirmed by the plant macrofossil data. From c. 1890 to 1954 macrophyte‐associated species of all three invertebrate groups remained abundant but the proportion of pelagic cladocerans rose. Post‐1954 mollusc and chironomid assemblages changed to sediment associated detrital feeders and the proportion of pelagic cladoceran taxa increased further. 4. The cladoceran‐based MRT model indicated a long period of stability, c. 1790–1927, characterised by abundant submerged macrophytes and zooplanktivorous fish. From c. 1927 to 1980, the MRT model inferred a decline in zooplanktivorous fish density (ZF) but relative stability in August macrophyte abundance. From 1980 to 2000, an increase in zooplanktivorous fish was inferred tallying well with available data on the fish population (since the 1970s), which indicated extirpation of perch in the 1970s and a subsequent increase in the rudd population. The model inferred little change in August macrophyte abundance until post‐c. 1980 at which point it indicated a decline. The surface sediment assemblage was placed in MRT group A, where submerged plants are absent or very rare in late summer in good agreement with current conditions at the site. 5. The MRT model, applied here for the first time, appears to have successfully tracked changes in macrophyte abundance and ZF over the last 200 years at Felbrigg Lake. The inferences agreed with historical observations on the fish community and the supporting palaeolimnological data. Given that multiple structuring forces shape most biological communities, the application of a model capable of allowing for this represents a significant advance in palaeolimnology.     

Effects of chronic elevated ozone concentration on antioxidant capacity,photosynthesis and seed yield of 10 soybean cultivars

Crops losses to tropospheric ozone (O₃) in the United States are estimated to cost $1–3 billion annually. This challenge is expected to increase as O₃ concentrations ([O₃]) rise over the next half century. This study tested the hypothesis that there is cultivar variation in the antioxidant, photosynthetic and yield response of soybean to growth at elevated [O₃]. Ten cultivars of soybean were grown at elevated [O₃] from germination through maturity at the Soybean Free Air Concentration Enrichment facility in 2007 and six were grown in 2008. Photosynthetic gas exchange, leaf area index, chlorophyll content, fluorescence and antioxidant capacity were monitored during the growing seasons in order to determine if changes in these parameters could be used to predict the sensitivity of seed yield to elevated [O₃]. Doubling background [O₃] decreased soybean yields by 17%, but the variation in response among cultivars and years ranged from 8 to 37%. Chlorophyll content and photosynthetic parameters were positively correlated with seed yield, while antioxidant capacity was negatively correlated with photosynthesis and seed yield, suggesting a trade‐off between antioxidant metabolism and carbon gain. Exposure response curves indicate that there has not been a significant improvement in soybean tolerance to [O₃] in the past 30 years.     

The skeletal structure of Desmophyllum cristagalli: the use of deep-water corals in sclerochronology

Skeletal banding has been found in the deep-water scleractinian coral Desmophyllum cristagalli , an important animal in studies of climate change. This banding pattern sheds light on skeletogenesis and suggests methods by which the record of climate change contained within the coral skeletons may be interpreted. A central wall built of trabeculae forms the interior of the septa and rings the theca. Lamellae form a sheath over the trabecular frame, showing continuity from thecal edge to septum. Skeletal bands are added by the tissue layer, which overlaps and seals the internal coral and upper portion of the outer theca. Truncated inner bands on the outer theca indicate a pattern of skeletal deposition and dissolution dependent on the presence or absence of the live tissue layer. A long-term record will be difficult to collect from D. cristagalli since lamellae are less than 10 μm thick and band position is unpredictable. Density banding in shallow-water coral skeletons has long been recognized as a valuable paleo-oceanographic tool, and deep-water corals are now being used to reconstruct deep-ocean environments. Pattern of skeletal growth must be carefully considered if deep-water corals are to be used as proxy climate recorders.     

Iron reduction in the metal-rich guts of wood-feeding termites

Termites play important roles in lignocellulose and humus turnover in diverse terrestrial ecosystems, and are significant sources of global atmospheric methane and carbon dioxide. All known termite species engage in obligate, complex nutritional symbioses with their gut microbes to carry out such processes. Several hundred microbial species, representing a broad phylogenetic and physiological diversity, are found within the well‐bounded, microliter‐in‐scale gut ecosystem of a given termite. However, most of these species have never been obtained in laboratory culture, and little can be said about their functional roles in the gut community or symbiosis. Herein, an unappreciated facet of the gut chemistry and microbiology of wood‐feeding termites is revealed: the redox metabolism of iron. Gut fluids from field‐collected termites contained millimolar amounts of ferrous iron and other heavy metals. When iron(III) hydroxides were amended to a filter paper diet of Zootermopsis nevadensis, a dampwood termite collected in the San Gabriel Mountains of Southern California, the specimens accumulated high levels of iron(II) in their guts. Additionally, iron was reduced at rapid initial rates in anoxic gut homogenates prepared from field‐collected Z. nevadensis specimens. A Clostridium sp. and a Desulfovibrio sp. were isolated from dilution‐to‐extinction enrichments of Z. nevadensis gut contents and were found to reduce iron(III), as did the termite gut spirochete Treponema primitia. The iron in the guts of wood‐feeding termites may influence the pathways of carbon‐ and electron‐flow, as well as microbial community composition in these tiny ecosystems of global importance.     

Atmospheric nitrogen deposition in world biodiversity hotspots: the need for a greater global perspective in assessing N deposition impacts

Increased atmospheric nitrogen (N) deposition is known to reduce plant diversity in natural and semi‐natural ecosystems, yet our understanding of these impacts comes almost entirely from studies in northern Europe and North America. Currently, we lack an understanding of the threat of N deposition to biodiversity at the global scale. In particular, rates of N deposition within the newly defined 34 world biodiversity hotspots, to which 50% of the world's floristic diversity is restricted, has not been quantified previously. Using output from global chemistry transport models, here we provide the first estimates of recent (mid‐1990s) and future (2050) rates and distributions of N deposition within biodiversity hotspots. Our analysis shows that the average deposition rate across these areas was 50% greater than the global terrestrial average in the mid‐1990s and could more than double by 2050, with 33 of 34 hotspots receiving greater N deposition in 2050 compared with 1990. By this time, 17 hotspots could have between 10% and 100% of their area receiving greater than 15 kg N ha^?1 yr^?1, a rate exceeding critical loads set for many sensitive European ecosystems. Average deposition in four hotspots is predicted to be greater than 20 kg N ha^?1 yr^?1. This elevated N deposition within areas of high plant diversity and endemism may exacerbate significantly the global threat of N deposition to world floristic diversity. Overall, we highlight the need for a greater global approach to assessing the impacts of N deposition.     

Comparative floral anatomy of Pontederiaceae

Floral anatomy is described in eight species (representing five genera) of Pontederiaceae, and floral ontogeny is described in Pontederia cordata. The results are assessed in the context of recent phylogenetic work on Pontederiaceae, which indicates that the unilocular ovary condition has been achieved by two different, non-homologous routes in Pontederiaceae: via loss of interlocular septa in Heteranthera and Hydrothrix , and via pseudomonomery in Pontederia , which has a single fertile carpel. Absence of septal nectaries has evolved more than once in Pontederiaceae, at least in Heterantha and Monochoria , probably due to a transfer of the insect reward from nectar to pollen in these taxa. The presence of an elliptical or linear unvascularized appendage on the abaxial outer stamen in Monochoria is also probably correlated with enantiostyly. In Pontederia , air spaces in the ovary wall are modified into canals, each with a ring of apparently secretory epithelial cells.  © 2004 The Linnean Society of London, Botanical Journal of the Linnean Society , 2004, 144 , 395–408.     

Spatial and temporal variation in a suite of life-history traits in two species of wolf spider

Abstract.  1. Life-history traits and density were assayed in seven populations of two sympatric species of wolf spider for three consecutive years. The goal of the study was to quantify population dynamics and its relation to spatial and temporal life-history variation.
2. Adult female body size and fecundity varied significantly, among field sites and among years, in both species. Female spiders of both species differed in mean relative reproductive effort among sites, but not among years. The size of offspring was invariable, with no significant differences due to site or year.
3. All populations of both species tended to either decrease or increase in density during a given year and this was tightly correlated with changes in prey consumption rates.
4. Since life-history patterns are determined primarily by selection, it is concluded that size at sexual maturity for females is phenotypically plastic and responds to changes in prey availability. Offspring size however is not plastic and it is likely that other selection forces have determined offspring size. Temporal fluctuations in population size are correlated over a large area relative to dispersal capabilities for these species and conservation efforts for invertebrates must take this into consideration.     

Spring remigration of the monarch butterfly, Danaus plexippus (Lepidoptera: Nymphalidae) in north-central Florida: estimating population parameters using mark-recapture

Monarch butterflies [Danaus plexippus) of the eastern North American population migrate each fall from die northern U.S.A. and southern Canada to overwintering sites in Mexico and return the following spring to the southeastern U.S.A. where they lay eggs and then die. The spring remigration is the least studied phase in the annual migration cycle. We therefore conducted a mark-recapture study and examined population recolonization dynamics and residence time in a north-central Florida pasture where the monarch's milkweed host plant (Asclepias humistrata) was abundant. Beginning in late March 1995 two waves of monarchs arrived, their numbers peaked at 71 individuals by mid-April, and the butterflies disappeared in early May. After arriving, the adults remained for 3–5 days, laid eggs and then continued to migrate. We also compared population sizes and arrival times in 1994 and 1996. We found no evidence of a second spring generation, which was also consistent with the deteriorating quality of the A. humistrata plants. Individuals of the new spring generation disappear shordy after eclosion. The arriving population was approximately nine times greater in 1995 than in 1996. Our findings support two recent hypodieses: (1) the bird-like migration of the monarch butterfly in North America evolved with the northward expansion and phenology of milkweeds; and (2) monarchs appear to be migratory throughout their annual cycle of several generations. By lingering for only a short time at each milkweed patch they encounter, the old monarchs returning from Mexico locate the resurgent milkweed flora over an extensive area in the southern states. Then, within less than a month, their fresh offspring continue the migration and exploit the unfolding cornucopia of milkweeds as the spring advances northward. The more we discover about the biology of this insect, the more remarkable is its annual migratory, breeding and overwintering cycle.